A Transcriptome Atlas Database for Mouse Embryo
     Quick Search:    for   
Quick Help:    Sitemap      Using Context Help  

Views and News

Top Recent Annotations
Gene SymbolAnnotations
Pou3f3 345 / 45
Kremen1 321 / 40
Serpine2 311 / 53
Tpm1 300 / 31
Cspg2 300 / 48
Slc44a1 243 / 35
Slc26a7 239 / 39
EG434907 237 / 30
Lrp5 236 / 34
Fzd3 235 / 32

Project Progress
Report date: 18/09/2023
RNA in-situ assays: 19440
Annotated assays: 15775

Eurexpress now incorporates version 7.0 of the Biomart data management system.
An Anatomy Atlas is now available.
Research Paper available on PlosBiology.
Annotation Highlights
Gene Expression Details for: Pou3f3
Description: POU domain, class 3, transcription factor 3
Template Id: T55158
Assay Id: euxassay_019559
Annotations: 345/45
Expression Levels 

Gene Expression Details for: Kremen1
Description: kringle containing transmembrane protein 1
Template Id: T71052
Assay Id: euxassay_019790
Annotations: 321/40
Expression Levels 

Eurexpress Data

Browse & Query by Keyword
Find gene information and expression pattern based on keywords, e.g.:
Genes beginning with "pax"
Genes with RefSeq containing "0326"
Genes with strong expression pattern
All genes that shown expression pattern

Browse Annotation
by Anatomy

This type of search uses the notion of the anatomy ontology. One can traverse the anatomy tree to discover expression patterns shown in various parts of embryo's anatomy

Browse & Query by Sequence
Find gene information and expression pattern based on nucleotide sequence, e.g.:
Gene sequence containing "ATTCG"
Sequence ending with "ATTCG"
Sequence starting with "ATTCG"
Upload search sequence from file

Advanced Search Interface
This search interface has now been superseded by the new biomart interface

Biomart Interface
Build and run custom queries to the Database