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    		  Assay description
    Asaay ID euxassay_000981
    Template ID T5309
    Gene Symbol Hoxa13
    Ref Sequence NM_008264
    Ensembl ID ENSMUSG00000038203
    Group of interest ENCODE
    Annotation results: 154 annotations on 22 anatomical structures

    01.jpg
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    06.jpg

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    11.jpg
    12.jpg

    13.jpg
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    19.jpg
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    23.jpg

    Assay annotation result

    Annotation colour codes:


    01.jpg
    TS23.embryo.limb.forelimb.handplate
    Strength: moderate
    Pattern: homogeneous
    TS23.embryo.limb.forelimb.handplate
    Strength: moderate
    Pattern: regional

    02.jpg
    TS23.embryo.limb.forelimb.handplate
    Strength: moderate
    Pattern: regional

    03.jpg
    TS23.embryo.limb.forelimb.handplate
    Strength: moderate
    Pattern: regional
    TS23.embryo.limb.hindlimb.footplate
    Strength: moderate
    Pattern: regional

    04.jpg
    TS23.embryo.limb.forelimb.handplate
    Strength: moderate
    Pattern: regional
    TS23.embryo.limb.forelimb.handplate.digit 2.mesenchyme.phalanx
    Strength: moderate
    Pattern: graded
    TS23.embryo.limb.forelimb.handplate.digit 3.mesenchyme.phalanx
    Strength: moderate
    Pattern: graded
    TS23.embryo.limb.forelimb.handplate.digit 4.mesenchyme.phalanx
    Strength: moderate
    Pattern: graded
    TS23.embryo.limb.forelimb.handplate.digit 5.mesenchyme.phalanx
    Strength: strong
    Pattern: graded
    TS23.embryo.limb.hindlimb.footplate
    Strength: moderate
    Pattern: regional
    TS23.embryo.limb.hindlimb.footplate.digit 1.mesenchyme.phalanx
    Strength: strong
    Pattern: graded

    05.jpg
    TS23.embryo.limb.forelimb.handplate.digit 3.mesenchyme.phalanx
    Strength: moderate
    Pattern: graded
    TS23.embryo.limb.forelimb.handplate.digit 3.mesenchyme.phalanx
    Strength: strong
    Pattern: regional
    TS23.embryo.limb.forelimb.handplate.digit 4.mesenchyme.phalanx
    Strength: moderate
    Pattern: graded
    TS23.embryo.limb.forelimb.handplate.digit 4.mesenchyme.phalanx
    Strength: strong
    Pattern: regional
    TS23.embryo.limb.hindlimb.footplate.digit 1.mesenchyme.phalanx
    Strength: strong
    Pattern: graded
    TS23.embryo.limb.hindlimb.footplate.digit 1.mesenchyme.phalanx
    Strength: strong
    Pattern: regional
    TS23.embryo.limb.hindlimb.footplate.digit 2.mesenchyme.phalanx
    Strength: moderate
    Pattern: graded

    06.jpg
    TS23.embryo.limb.forelimb.handplate.digit 1.mesenchyme.phalanx
    Strength: strong
    Pattern: homogeneous
    TS23.embryo.limb.forelimb.handplate.digit 1.mesenchyme.phalanx
    Strength: strong
    Pattern: regional
    TS23.embryo.limb.forelimb.handplate.digit 2.mesenchyme.phalanx
    Strength: strong
    Pattern: regional
    TS23.embryo.limb.forelimb.handplate.digit 2.mesenchyme.phalanx
    Strength: strong
    Pattern: homogeneous
    TS23.embryo.limb.forelimb.handplate.digit 3.mesenchyme.phalanx
    Strength: strong
    Pattern: homogeneous
    TS23.embryo.limb.forelimb.handplate.digit 3.mesenchyme.phalanx
    Strength: strong
    Pattern: regional
    TS23.embryo.limb.forelimb.handplate.digit 4.mesenchyme.phalanx
    Strength: strong
    Pattern: homogeneous
    TS23.embryo.limb.forelimb.handplate.digit 4.mesenchyme.phalanx
    Strength: strong
    Pattern: regional
    TS23.embryo.limb.hindlimb.footplate.digit 1.mesenchyme.phalanx
    Strength: strong
    Pattern: regional
    TS23.embryo.limb.hindlimb.footplate.digit 1.mesenchyme.phalanx
    Strength: strong
    Pattern: graded
    TS23.embryo.limb.hindlimb.footplate.digit 2.mesenchyme.phalanx
    Strength: strong
    Pattern: graded
    TS23.embryo.limb.hindlimb.footplate.digit 2.mesenchyme.phalanx
    Strength: strong
    Pattern: regional
    TS23.embryo.limb.hindlimb.footplate.digit 3.mesenchyme.phalanx
    Strength: strong
    Pattern: regional
    TS23.embryo.limb.hindlimb.footplate.digit 3.mesenchyme.phalanx
    Strength: strong
    Pattern: graded

    07.jpg
    TS23.embryo.limb.forelimb.handplate.digit 1.mesenchyme.phalanx
    Strength: strong
    Pattern: regional
    TS23.embryo.limb.forelimb.handplate.digit 1.mesenchyme.phalanx
    Strength: strong
    Pattern: graded
    TS23.embryo.limb.forelimb.handplate.digit 2.mesenchyme.phalanx
    Strength: strong
    Pattern: regional
    TS23.embryo.limb.forelimb.handplate.digit 2.mesenchyme.phalanx
    Strength: strong
    Pattern: graded
    TS23.embryo.limb.forelimb.handplate.digit 3.mesenchyme.phalanx
    Strength: strong
    Pattern: regional
    TS23.embryo.limb.forelimb.handplate.digit 3.mesenchyme.phalanx
    Strength: strong
    Pattern: graded
    TS23.embryo.limb.hindlimb.footplate.digit 1.mesenchyme.phalanx
    Strength: strong
    Pattern: regional
    TS23.embryo.limb.hindlimb.footplate.digit 2.mesenchyme.phalanx
    Strength: strong
    Pattern: graded
    TS23.embryo.limb.hindlimb.footplate.digit 2.mesenchyme.phalanx
    Strength: strong
    Pattern: regional
    TS23.embryo.limb.hindlimb.footplate.digit 3.mesenchyme.phalanx
    Strength: strong
    Pattern: graded
    TS23.embryo.limb.hindlimb.footplate.digit 3.mesenchyme.phalanx
    Strength: strong
    Pattern: regional
    TS23.embryo.limb.hindlimb.footplate.digit 4.mesenchyme.phalanx
    Strength: strong
    Pattern: regional
    TS23.embryo.limb.hindlimb.footplate.digit 4.mesenchyme.phalanx
    Strength: strong
    Pattern: graded
    TS23.embryo.limb.hindlimb.footplate.digit 5.mesenchyme.phalanx
    Strength: strong
    Pattern: graded
    TS23.embryo.limb.hindlimb.footplate.digit 5.mesenchyme.phalanx
    Strength: strong
    Pattern: regional

    08.jpg
    TS23.embryo.limb.forelimb.handplate.digit 2.mesenchyme.phalanx
    Strength: strong
    Pattern: graded
    TS23.embryo.limb.forelimb.handplate.digit 2.mesenchyme.phalanx
    Strength: strong
    Pattern: regional
    TS23.embryo.limb.forelimb.handplate.digit 3.mesenchyme.phalanx
    Strength: strong
    Pattern: graded
    TS23.embryo.limb.forelimb.handplate.digit 4.mesenchyme.phalanx
    Strength: strong
    Pattern: regional
    TS23.embryo.limb.hindlimb.footplate.digit 3.mesenchyme.phalanx
    Strength: strong
    Pattern: regional
    TS23.embryo.limb.hindlimb.footplate.digit 3.mesenchyme.phalanx
    Strength: strong
    Pattern: graded
    TS23.embryo.limb.hindlimb.footplate.digit 4.mesenchyme.phalanx
    Strength: strong
    Pattern: graded
    TS23.embryo.limb.hindlimb.footplate.digit 4.mesenchyme.phalanx
    Strength: strong
    Pattern: regional
    TS23.embryo.limb.hindlimb.footplate.digit 5.mesenchyme.phalanx
    Strength: strong
    Pattern: graded
    TS23.embryo.limb.hindlimb.footplate.digit 5.mesenchyme.phalanx
    Strength: strong
    Pattern: regional

    09.jpg
    TS23.embryo.limb.forelimb.handplate.digit 3.mesenchyme.phalanx
    Strength: strong
    Pattern: graded
    TS23.embryo.limb.forelimb.handplate.digit 3.mesenchyme.phalanx
    Strength: strong
    Pattern: regional
    TS23.embryo.limb.hindlimb.footplate.digit 3.mesenchyme.phalanx
    Strength: strong
    Pattern: graded
    TS23.embryo.limb.hindlimb.footplate.digit 3.mesenchyme.phalanx
    Strength: strong
    Pattern: regional
    TS23.embryo.limb.hindlimb.footplate.digit 4.mesenchyme.phalanx
    Strength: strong
    Pattern: graded
    TS23.embryo.limb.hindlimb.footplate.digit 4.mesenchyme.phalanx
    Strength: strong
    Pattern: regional
    TS23.embryo.limb.hindlimb.footplate.digit 5.mesenchyme.phalanx
    Strength: strong
    Pattern: graded
    TS23.embryo.limb.hindlimb.footplate.digit 5.mesenchyme.phalanx
    Strength: strong
    Pattern: regional

    10.jpg

    11.jpg

    12.jpg
    TS23.embryo.organ system.visceral organ.reproductive system.female.genital tubercle
    Strength: moderate
    Pattern: regional
    TS23.embryo.organ system.visceral organ.reproductive system.male.genital tubercle
    Strength: moderate
    Pattern: homogeneous

    13.jpg
    TS23.embryo.organ system.visceral organ.renal/urinary system.bladder.fundus region
    Strength: moderate
    Pattern: homogeneous
    TS23.embryo.organ system.visceral organ.renal/urinary system.bladder.fundus region
    Strength: moderate
    Pattern: regional
    TS23.embryo.organ system.visceral organ.renal/urinary system.bladder.urachus
    Strength: moderate
    Pattern: homogeneous
    TS23.embryo.organ system.visceral organ.renal/urinary system.bladder.urachus
    Strength: moderate
    Pattern: regional
    TS23.embryo.organ system.visceral organ.reproductive system.male.genital tubercle
    Strength: strong
    Pattern: homogeneous
    TS23.embryo.organ system.visceral organ.reproductive system.male.genital tubercle
    Strength: moderate
    Pattern: regional
    TS23.embryo.organ system.visceral organ.reproductive system.male.penis
    Strength: strong
    Pattern: homogeneous
    TS23.embryo.organ system.visceral organ.reproductive system.male.penis
    Strength: moderate
    Pattern: regional
    TS23.embryo.organ system.visceral organ.reproductive system.male.urethra.urethral groove
    Strength: strong
    Pattern: homogeneous
    TS23.embryo.organ system.visceral organ.reproductive system.male.urethra.urethral groove
    Strength: moderate
    Pattern: regional

    14.jpg
    TS23.embryo.organ system.nervous system.central nervous system.spinal cord
    Strength: moderate
    Pattern: regional
    TS23.embryo.organ system.visceral organ.reproductive system.male.genital tubercle
    Strength: moderate
    Pattern: regional
    TS23.embryo.organ system.visceral organ.reproductive system.male.genital tubercle
    Strength: strong
    Pattern: graded
    TS23.embryo.organ system.visceral organ.reproductive system.male.penis
    Strength: strong
    Pattern: graded
    TS23.embryo.organ system.visceral organ.reproductive system.male.penis
    Strength: moderate
    Pattern: regional
    TS23.embryo.organ system.visceral organ.reproductive system.male.urethra.urethral groove
    Strength: moderate
    Pattern: regional
    TS23.embryo.organ system.visceral organ.reproductive system.male.urethra.urethral groove
    Strength: strong
    Pattern: graded
    TS23.embryo.tail.mesenchyme
    Strength: moderate
    Pattern: graded
    TS23.embryo.tail.mesenchyme
    Strength: moderate
    Pattern: regional
    TS23.embryo.tail.nervous system.central nervous system.spinal cord
    Strength: moderate
    Pattern: graded

    15.jpg
    TS23.embryo.organ system.nervous system.central nervous system.spinal cord
    Strength: moderate
    Pattern: regional
    TS23.embryo.organ system.visceral organ.renal/urinary system.bladder.fundus region
    Strength: moderate
    Pattern: regional
    TS23.embryo.organ system.visceral organ.renal/urinary system.bladder.fundus region
    Strength: moderate
    Pattern: homogeneous
    TS23.embryo.organ system.visceral organ.renal/urinary system.metanephros.drainage component.ureter
    Strength: moderate
    Pattern: graded
    TS23.embryo.organ system.visceral organ.renal/urinary system.metanephros.drainage component.ureter
    Strength: moderate
    Pattern: regional
    TS23.embryo.organ system.visceral organ.reproductive system.female.genital tubercle
    Strength: moderate
    Pattern: regional
    TS23.embryo.organ system.visceral organ.reproductive system.male.genital tubercle
    Strength: strong
    Pattern: graded
    TS23.embryo.organ system.visceral organ.reproductive system.male.penis
    Strength: strong
    Pattern: graded
    TS23.embryo.organ system.visceral organ.reproductive system.male.penis
    Strength: moderate
    Pattern: regional
    TS23.embryo.tail.mesenchyme
    Strength: moderate
    Pattern: graded
    TS23.embryo.tail.mesenchyme
    Strength: moderate
    Pattern: regional
    TS23.embryo.tail.nervous system.central nervous system.spinal cord
    Strength: moderate
    Pattern: graded

    16.jpg

    17.jpg
    TS23.embryo.limb.hindlimb.footplate.digit 3.mesenchyme.phalanx
    Strength: strong
    Pattern: graded
    TS23.embryo.limb.hindlimb.footplate.digit 3.mesenchyme.phalanx
    Strength: strong
    Pattern: regional
    TS23.embryo.limb.hindlimb.footplate.digit 4.mesenchyme.phalanx
    Strength: strong
    Pattern: graded
    TS23.embryo.limb.hindlimb.footplate.digit 4.mesenchyme.phalanx
    Strength: strong
    Pattern: regional
    TS23.embryo.limb.hindlimb.footplate.digit 5.mesenchyme.phalanx
    Strength: strong
    Pattern: graded
    TS23.embryo.limb.hindlimb.footplate.digit 5.mesenchyme.phalanx
    Strength: strong
    Pattern: regional

    18.jpg
    TS23.embryo.limb.hindlimb.footplate.digit 2.mesenchyme.phalanx
    Strength: strong
    Pattern: graded
    TS23.embryo.limb.hindlimb.footplate.digit 2.mesenchyme.phalanx
    Strength: strong
    Pattern: regional
    TS23.embryo.limb.hindlimb.footplate.digit 3.mesenchyme.phalanx
    Strength: strong
    Pattern: graded
    TS23.embryo.limb.hindlimb.footplate.digit 3.mesenchyme.phalanx
    Strength: strong
    Pattern: regional
    TS23.embryo.limb.hindlimb.footplate.digit 4.mesenchyme.phalanx
    Strength: strong
    Pattern: graded
    TS23.embryo.limb.hindlimb.footplate.digit 4.mesenchyme.phalanx
    Strength: strong
    Pattern: regional
    TS23.embryo.limb.hindlimb.footplate.digit 5.mesenchyme.phalanx
    Strength: strong
    Pattern: graded
    TS23.embryo.limb.hindlimb.footplate.digit 5.mesenchyme.phalanx
    Strength: strong
    Pattern: regional

    19.jpg
    TS23.embryo.limb.hindlimb.footplate.digit 1.mesenchyme.phalanx
    Strength: strong
    Pattern: graded
    TS23.embryo.limb.hindlimb.footplate.digit 1.mesenchyme.phalanx
    Strength: strong
    Pattern: regional
    TS23.embryo.limb.hindlimb.footplate.digit 2.mesenchyme.phalanx
    Strength: strong
    Pattern: graded
    TS23.embryo.limb.hindlimb.footplate.digit 2.mesenchyme.phalanx
    Strength: strong
    Pattern: regional
    TS23.embryo.limb.hindlimb.footplate.digit 3.mesenchyme.phalanx
    Strength: strong
    Pattern: graded
    TS23.embryo.limb.hindlimb.footplate.digit 3.mesenchyme.phalanx
    Strength: strong
    Pattern: regional
    TS23.embryo.limb.hindlimb.footplate.digit 4.mesenchyme.phalanx
    Strength: strong
    Pattern: graded
    TS23.embryo.limb.hindlimb.footplate.digit 4.mesenchyme.phalanx
    Strength: strong
    Pattern: regional

    20.jpg
    TS23.embryo.limb.hindlimb.footplate.digit 1.mesenchyme.phalanx
    Strength: strong
    Pattern: graded
    TS23.embryo.limb.hindlimb.footplate.digit 1.mesenchyme.phalanx
    Strength: strong
    Pattern: regional
    TS23.embryo.limb.hindlimb.footplate.digit 2.mesenchyme.phalanx
    Strength: strong
    Pattern: graded
    TS23.embryo.limb.hindlimb.footplate.digit 2.mesenchyme.phalanx
    Strength: strong
    Pattern: regional
    TS23.embryo.limb.hindlimb.footplate.digit 3.mesenchyme.phalanx
    Strength: strong
    Pattern: graded
    TS23.embryo.limb.hindlimb.footplate.digit 3.mesenchyme.phalanx
    Strength: strong
    Pattern: regional
    TS23.embryo.limb.hindlimb.footplate.digit 4.mesenchyme.phalanx
    Strength: strong
    Pattern: graded
    TS23.embryo.limb.hindlimb.footplate.digit 4.mesenchyme.phalanx
    Strength: strong
    Pattern: regional
    TS23.embryo.limb.hindlimb.footplate.digit 5.mesenchyme.phalanx
    Strength: strong
    Pattern: graded
    TS23.embryo.limb.hindlimb.footplate.digit 5.mesenchyme.phalanx
    Strength: strong
    Pattern: regional

    21.jpg
    TS23.embryo.limb.forelimb.handplate.digit 1.mesenchyme.phalanx
    Strength: strong
    Pattern: regional
    TS23.embryo.limb.forelimb.handplate.digit 1.mesenchyme.phalanx
    Strength: strong
    Pattern: graded
    TS23.embryo.limb.forelimb.handplate.digit 2.mesenchyme.phalanx
    Strength: strong
    Pattern: regional
    TS23.embryo.limb.forelimb.handplate.digit 2.mesenchyme.phalanx
    Strength: strong
    Pattern: graded
    TS23.embryo.limb.hindlimb.footplate.digit 1.mesenchyme.phalanx
    Strength: moderate
    Pattern: graded
    TS23.embryo.limb.hindlimb.footplate.digit 2.mesenchyme.phalanx
    Strength: moderate
    Pattern: graded
    TS23.embryo.limb.hindlimb.footplate.digit 2.mesenchyme.phalanx
    Strength: strong
    Pattern: regional
    TS23.embryo.limb.hindlimb.footplate.digit 3.mesenchyme.phalanx
    Strength: moderate
    Pattern: graded
    TS23.embryo.limb.hindlimb.footplate.digit 3.mesenchyme.phalanx
    Strength: strong
    Pattern: regional
    TS23.embryo.limb.hindlimb.footplate.digit 4.mesenchyme.phalanx
    Strength: strong
    Pattern: regional
    TS23.embryo.limb.hindlimb.footplate.digit 4.mesenchyme.phalanx
    Strength: moderate
    Pattern: graded
    TS23.embryo.limb.hindlimb.footplate.digit 5.mesenchyme.phalanx
    Strength: strong
    Pattern: regional
    TS23.embryo.limb.hindlimb.footplate.digit 5.mesenchyme.phalanx
    Strength: moderate
    Pattern: graded

    22.jpg
    TS23.embryo.limb.forelimb.handplate.digit 1.mesenchyme.phalanx
    Strength: strong
    Pattern: graded
    TS23.embryo.limb.forelimb.handplate.digit 2.mesenchyme.phalanx
    Strength: strong
    Pattern: graded
    TS23.embryo.limb.forelimb.handplate.digit 2.mesenchyme.phalanx
    Strength: strong
    Pattern: regional

    23.jpg
    TS23.embryo.limb.forelimb.handplate.digit 3.mesenchyme.phalanx
    Strength: strong
    Pattern: graded
    TS23.embryo.limb.forelimb.handplate.digit 3.mesenchyme.phalanx
    Strength: strong
    Pattern: regional
    TS23.embryo.limb.forelimb.handplate.digit 4.mesenchyme.phalanx
    Strength: strong
    Pattern: graded
    TS23.embryo.limb.forelimb.handplate.digit 4.mesenchyme.phalanx
    Strength: strong
    Pattern: regional
    TS23.embryo.limb.forelimb.handplate.digit 5.mesenchyme.phalanx
    Strength: strong
    Pattern: graded
    TS23.embryo.limb.forelimb.handplate.digit 5.mesenchyme.phalanx
    Strength: strong
    Pattern: regional
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